CL47

FASTA

Metadata

Reference

Data

identifier CL47
alternative_identifiers -
country Italy
continent Europe
region southern Europe
culture Longobards
epoch Middle Ages
group LONG
comment -
latitude 45.08333206176758
longitude 7.5833330154418945
sex F
site Collegno
site_detail -
mt_hg H11a
ychr_hg -
year_from 570
year_to 880
date_detail 570-880 CE (Phase 1: 570/590–630/640, Phase 2: 640–700, Phase 3: 8th century)
bp -
c14_lab_code -
c14_sample_tag -
c14_layer_tag True
avg_coverage 13.569999694824219
sequence_source reconstructed
reference Amorim et al. 2018. Understanding 6th-century barbarian social organization and migration through paleogenomics. Nature Communications, 9(1), ?. (link)
data_link https://www.ncbi.nlm.nih.gov/biosample/8513174
ychr_snps -
mitopathos [{'allele': '195C', 'position': 195, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['BD-associated / melanoma pts']}, {'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '961G', 'position': 961, 'status': 'Unclear', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-RNR1'], 'diseases': ['Possibly DEAF-associated']}]