20036

FASTA

Metadata

Reference

Data

identifier	20036
alternative_identifiers	-
country	Turkey
continent	Asia
region	Anatolia
culture	Çatalhöyük
epoch	Neolithic
group	NENE
comment	Middle Neolithic, probable XY
latitude	37.66666793823242
longitude	32.82805633544922
sex	U
site	Çatalhöyük
site_detail	-
mt_hg	U3b
ychr_hg	-
year_from	-6450
year_to	-6380
date_detail	6450-6380 calBCE
bp	-
c14_lab_code	-
c14_sample_tag	-
c14_layer_tag	True
avg_coverage	242.3000030517578
sequence_source	reconstructed
reference	Chyleński et al. 2019. Ancient Mitochondrial Genomes Reveal the Absence of Maternal Kinship in the Burials of Çatalhöyük People and Their Genetic Affinities. Genes, 10(3), 207. (link)
data_link	https://www.ncbi.nlm.nih.gov/popset/1561759632
ychr_snps	-
mitopathos	[{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '150T', 'position': 150, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Longevity / Cervical Carcinoma / HPV infection risk']}, {'allele': '4640A', 'position': 4640, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND2'], 'diseases': ['LHON / Epilepsy']}]