20036

FASTA

Metadata

Reference

Data

identifier 20036
alternative_identifiers -
country Turkey
continent Asia
region Anatolia
culture Çatalhöyük
epoch Neolithic
group NENE
comment Middle Neolithic, probable XY
latitude 37.66666793823242
longitude 32.82805633544922
sex U
site Çatalhöyük
site_detail -
mt_hg U3b
ychr_hg -
year_from -6450
year_to -6380
date_detail 6450-6380 calBCE
bp -
c14_lab_code -
c14_sample_tag -
c14_layer_tag True
avg_coverage 242.3000030517578
sequence_source reconstructed
reference Chyleński et al. 2019. Ancient Mitochondrial Genomes Reveal the Absence of Maternal Kinship in the Burials of Çatalhöyük People and Their Genetic Affinities. Genes, 10(3), 207. (link)
data_link https://www.ncbi.nlm.nih.gov/popset/1561759632
ychr_snps -
mitopathos [{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '150T', 'position': 150, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Longevity / Cervical Carcinoma / HPV infection risk']}, {'allele': '4640A', 'position': 4640, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND2'], 'diseases': ['LHON / Epilepsy']}]