| identifier |
ANI160 |
| alternative_identifiers |
['VAR127'] |
| country |
Bulgaria |
| continent |
Europe |
| region |
Balkans |
| culture |
Bulgaria_Varna_Eneolithic2 |
| epoch |
Copper Age |
| group |
CABA |
| comment |
- |
| latitude |
43.209999084472656 |
| longitude |
27.860000610351562 |
| sex |
M |
| site |
Varna |
| site_detail |
- |
| mt_hg |
H1ag |
| ychr_hg |
G2 |
| year_from |
-4685 |
| year_to |
-4499 |
| date_detail |
4685-4499 calBCE (5735±31 BP, OxA-24041) |
| bp |
5735±31 |
| c14_lab_code |
OxA-24041 |
| c14_sample_tag |
True |
| c14_layer_tag |
- |
| avg_coverage |
- |
| sequence_source |
bam |
| reference |
Mathieson et al. 2018. The genomic history of southeastern Europe. Nature, 555(7695), 197-203.
(link)
|
| data_link |
https://www.ebi.ac.uk/ena/data/view/PRJEB22652
|
| ychr_snps |
['G2:CTS1900:14116322T->A', 'G:CTS34:2681740G->A', 'G:F1131:8240725C->T', 'G2:CTS6742:17088129G->C', 'G:M3464:7537950C->T', 'G:S1435:13658486C->G', 'G:CTS1139:7231638A->G']
|
| mitopathos |
[{'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '3310T', 'position': 3310, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-ND1'], 'diseases': ['Diabetes / HCM']}]
|