AV2

FASTA

Metadata

Reference

Data

identifier AV2
alternative_identifiers -
country Hungary
continent Europe
region Pannonia
culture Avars
epoch Middle Ages
group MAHu
comment -
latitude 46.78821563720703
longitude 17.842775344848633
sex F
site Szólad
site_detail -
mt_hg X2m'n
ychr_hg -
year_from 548
year_to 641
date_detail 548-641
bp 1472±27
c14_lab_code -
c14_sample_tag True
c14_layer_tag -
avg_coverage 12.4399995803833
sequence_source reconstructed
reference Amorim et al. 2018. Understanding 6th-century barbarian social organization and migration through paleogenomics. Nature Communications, 9(1), ?. (link)
data_link https://www.ncbi.nlm.nih.gov/biosample/8513216
ychr_snps -
mitopathos [{'allele': '12705T', 'position': 12705, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CO1'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '16183C', 'position': 16183, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Melanoma patients']}, {'allele': '16189C', 'position': 16189, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Diabetes / Cardiomyopathy /cancer risk / mtDNA copy nbr / Metabolic Syndrome / Melanoma patients']}, {'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}]