Ampack_1

FASTA

Metadata

Reference

Data

identifier Ampack_1
alternative_identifiers ['none']
country Germany
continent Europe
region central Europe
culture Bell Beaker
epoch Bronze Age
group BBC
comment -
latitude 48.259124755859375
longitude 10.873848915100098
sex M
site Königsbrunn, Ampack
site_detail -
mt_hg T2b33
ychr_hg -
year_from -2476
year_to -2310
date_detail cal BC 2476-2310
bp 3924±23
c14_lab_code MAMS-18887
c14_sample_tag True
c14_layer_tag -
avg_coverage 1897.4000244140625
sequence_source reconstructed
reference Knipper et al. 2017. Female exogamy and gene pool diversification at the transition from the Final Neolithic to the Early Bronze Age in central Europe. Proceedings of the National Academy of Sciences, 114(38), 10083-10088. (link)
data_link https://www.ncbi.nlm.nih.gov/popset/1240339410
ychr_snps -
mitopathos [{'allele': '11251G', 'position': 11251, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-ND4'], 'diseases': ['Reduced risk of PD']}, {'allele': '15928A', 'position': 15928, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-TT'], 'diseases': ['Multiple Sclerosis / idiopathic repeat miscarriage / AD protection']}, {'allele': '4216C', 'position': 4216, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND1'], 'diseases': ['LHON / Insulin Resistance /possible adaptive high altitude variant / miscarriage']}, {'allele': '4917G', 'position': 4917, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND2'], 'diseases': ['LHON / Insulin Resistance / AMD / NRTI-PN']}]