Ardu1

FASTA

Metadata

Reference

Data

identifier	Ardu1
alternative_identifiers	['MA976']
country	Estonia
continent	Europe
region	Baltic
culture	Corded Ware
epoch	Neolithic
group	CWC
comment	-
latitude	59.099998474121094
longitude	25.366666793823242
sex	M
site	Ardu, Harju county
site_detail	-
mt_hg	T2a1a
ychr_hg	R1a-Z645
year_from	-2850
year_to	-2050
date_detail	4800–4000 calBP
bp	4110±40
c14_lab_code	Poz-10824
c14_sample_tag	True
c14_layer_tag	-
avg_coverage	98.72000122070312
sequence_source	bam
reference	Saag et al. 2017. Extensive Farming in Estonia Started through a Sex-Biased Migration from the Steppe. Current Biology, 27(14), 2185-2193.e6. (link)
data_link	https://www.ebi.ac.uk/ena/data/view/PRJEB21037
ychr_snps	-
mitopathos	[{'allele': '11251G', 'position': 11251, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-ND4'], 'diseases': ['Reduced risk of PD']}, {'allele': '14687G', 'position': 14687, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-TE'], 'diseases': ['Mito myopathy w respiratory failure / intellectual disability']}, {'allele': '15928A', 'position': 15928, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-TT'], 'diseases': ['Multiple Sclerosis / idiopathic repeat miscarriage / AD protection']}, {'allele': '4216C', 'position': 4216, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND1'], 'diseases': ['LHON / Insulin Resistance /possible adaptive high altitude variant / miscarriage']}, {'allele': '4917G', 'position': 4917, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND2'], 'diseases': ['LHON / Insulin Resistance / AMD / NRTI-PN']}]