Ardu1
FASTA
Metadata
Reference
Data
| identifier | Ardu1 |
|---|---|
| alternative_identifiers | ['MA976'] |
| country | Estonia |
| continent | Europe |
| region | Baltic |
| culture | Corded Ware |
| epoch | Neolithic |
| group | CWC |
| comment | - |
| latitude | 59.099998474121094 |
| longitude | 25.366666793823242 |
| sex | M |
| site | Ardu, Harju county |
| site_detail | - |
| mt_hg | T2a1a |
| ychr_hg | R1a-Z645 |
| year_from | -2850 |
| year_to | -2050 |
| date_detail | 4800–4000 calBP |
| bp | 4110±40 |
| c14_lab_code | Poz-10824 |
| c14_sample_tag | True |
| c14_layer_tag | - |
| avg_coverage | 98.72000122070312 |
| sequence_source | bam |
| reference | Saag et al. 2017. Extensive Farming in Estonia Started through a Sex-Biased Migration from the Steppe. Current Biology, 27(14), 2185-2193.e6. (link) |
| data_link | https://www.ebi.ac.uk/ena/data/view/PRJEB21037 |
| ychr_snps | - |
| mitopathos | [{'allele': '11251G', 'position': 11251, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-ND4'], 'diseases': ['Reduced risk of PD']}, {'allele': '14687G', 'position': 14687, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-TE'], 'diseases': ['Mito myopathy w respiratory failure / intellectual disability']}, {'allele': '15928A', 'position': 15928, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-TT'], 'diseases': ['Multiple Sclerosis / idiopathic repeat miscarriage / AD protection']}, {'allele': '4216C', 'position': 4216, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND1'], 'diseases': ['LHON / Insulin Resistance /possible adaptive high altitude variant / miscarriage']}, {'allele': '4917G', 'position': 4917, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND2'], 'diseases': ['LHON / Insulin Resistance / AMD / NRTI-PN']}] |
Ardu1
