BIM_37
FASTA
Metadata
Reference
Data
| identifier | BIM_37 |
|---|---|
| alternative_identifiers | ['SAMEA104354395'] |
| country | Germany |
| continent | Europe |
| region | central Europe |
| culture | Germany_EMA |
| epoch | Middle Ages |
| group | MAGe |
| comment | - |
| latitude | 49.01142120361328 |
| longitude | 12.159494400024414 |
| sex | M |
| site | Barbing-Irlmauth |
| site_detail | no grave goods attributable |
| mt_hg | T2b16 |
| ychr_hg | - |
| year_from | 580 |
| year_to | 620 |
| date_detail | 580 – 620 AD |
| bp | - |
| c14_lab_code | - |
| c14_sample_tag | - |
| c14_layer_tag | True |
| avg_coverage | 183.41000366210938 |
| sequence_source | bam |
| reference | Veeramah et al. 2018. Population genomic analysis of elongated skulls reveals extensive female-biased immigration in Early Medieval Bavaria. Proceedings of the National Academy of Sciences, 115(13), 3494-3499. (link) |
| data_link | https://www.ebi.ac.uk/ena/data/view/SAMEA104354395 |
| ychr_snps | - |
| mitopathos | [{'allele': '11251G', 'position': 11251, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-ND4'], 'diseases': ['Reduced risk of PD']}, {'allele': '15928A', 'position': 15928, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-TT'], 'diseases': ['Multiple Sclerosis / idiopathic repeat miscarriage / AD protection']}, {'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '4917G', 'position': 4917, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND2'], 'diseases': ['LHON / Insulin Resistance / AMD / NRTI-PN']}] |