CL31

FASTA

Metadata

Reference

Data

identifier CL31
alternative_identifiers -
country Italy
continent Europe
region southern Europe
culture Longobards
epoch Middle Ages
group LONG
comment -
latitude 45.08333206176758
longitude 7.5833330154418945
sex M
site Collegno
site_detail -
mt_hg H18
ychr_hg G2a1a1
year_from 570
year_to 880
date_detail 570-880 CE (Phase 1: 570/590–630/640, Phase 2: 640–700, Phase 3: 8th century)
bp -
c14_lab_code -
c14_sample_tag -
c14_layer_tag True
avg_coverage 10.779999732971191
sequence_source reconstructed
reference Amorim et al. 2018. Understanding 6th-century barbarian social organization and migration through paleogenomics. Nature Communications, 9(1), ?. (link)
data_link https://www.ncbi.nlm.nih.gov/biosample/8513171
ychr_snps ['Z6644']
mitopathos [{'allele': '13708A', 'position': 13708, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-ND5'], 'diseases': ['LHON / Increased MS risk / higher freq in PD-ADS']}]