DA101

FASTA

Metadata

Reference

Data

identifier	DA101
alternative_identifiers	['Kyr 59']
country	Kyrgyzstan
continent	Asia
region	Tian Shan
culture	Hun
epoch	Iron Age
group	IAKy
comment	-
latitude	42.15944290161133
longitude	77.40638732910156
sex	M
site	Kurgan nr. 14, Uch-Kurbu
site_detail	individual 2.
mt_hg	U5a1b1e
ychr_hg	R1
year_from	214
year_to	261
date_detail	-
bp	1783±29
c14_lab_code	UBA-31214
c14_sample_tag	True
c14_layer_tag	-
avg_coverage	1806.030029296875
sequence_source	bam
reference	de Barros Damgaard et al. 2018. 137 ancient human genomes from across the Eurasian steppes. Nature, 557(7705), 369-374. (link)
data_link	https://www.ebi.ac.uk/ena/data/view/PRJEB20658
ychr_snps	-
mitopathos	[{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '16192T', 'position': 16192, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-CR'], 'diseases': ['Melanoma patients']}, {'allele': '16270T', 'position': 16270, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-CR'], 'diseases': ['Melanoma patients']}]