DA161

FASTA

Metadata

Reference

Data

identifier DA161
alternative_identifiers ['Alan4']
country Russia
continent Europe
region Caucasus
culture Alan
epoch Iron Age
group IACA
comment Late Iron Age to Medieval
latitude 42.826263427734375
longitude 44.11581039428711
sex M
site North Ossetia-Alania
site_detail -
mt_hg X2f
ychr_hg -
year_from 300
year_to 1400
date_detail 300-1400 CE
bp -
c14_lab_code -
c14_sample_tag -
c14_layer_tag True
avg_coverage 33.979000091552734
sequence_source bam
reference de Barros Damgaard et al. 2018. 137 ancient human genomes from across the Eurasian steppes. Nature, 557(7705), 369-374. (link)
data_link https://www.ebi.ac.uk/ena/data/view/PRJEB20658
ychr_snps -
mitopathos [{'allele': '12705T', 'position': 12705, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CO1'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '146C', 'position': 146, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Absence of Endometriosis']}, {'allele': '16189C', 'position': 16189, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Diabetes / Cardiomyopathy /cancer risk / mtDNA copy nbr / Metabolic Syndrome / Melanoma patients']}, {'allele': '195C', 'position': 195, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['BD-associated / melanoma pts']}]