DA229

FASTA

Metadata

Reference

Data

identifier	DA229
alternative_identifiers	['Kaynar Bulak 2 burial site', 'mound 11', 'skeleton 2']
country	Kazakhstan
continent	Asia
region	Central steppe
culture	Kangju
epoch	Iron Age
group	IAST
comment	Late Iron Age to Medieval
latitude	42.459720611572266
longitude	69.69972229003906
sex	M
site	Kaynar Bulak 2 burial site, mound 11, skeleton 2
site_detail	-
mt_hg	A8a1
ychr_hg	R1a1
year_from	-250
year_to	250
date_detail	2200-1700 BP
bp	-
c14_lab_code	-
c14_sample_tag	-
c14_layer_tag	True
avg_coverage	3.8359999656677246
sequence_source	bam
reference	de Barros Damgaard et al. 2018. 137 ancient human genomes from across the Eurasian steppes. Nature, 557(7705), 369-374. (link)
data_link	https://www.ebi.ac.uk/ena/data/view/PRJEB20658
ychr_snps	-
mitopathos	[{'allele': '12705T', 'position': 12705, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CO1'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '146C', 'position': 146, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Absence of Endometriosis']}, {'allele': '4440A', 'position': 4440, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-TM'], 'diseases': ['Mitochondrial myopathy']}, {'allele': '663G', 'position': 663, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-RNR1'], 'diseases': ['Coronary atherosclerosis risk']}, {'allele': '6962A', 'position': 6962, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CO1'], 'diseases': ['Possible helper variant for 15927A']}]