DA230
FASTA
Metadata
Reference
Data
identifier | DA230 |
---|---|
alternative_identifiers | ['Butakty 1 settlement'] |
country | Kazakhstan |
continent | Asia |
region | Tian Shan |
culture | Karluk |
epoch | Middle Ages |
group | MAKa |
comment | - |
latitude | 43.20249938964844 |
longitude | 76.9816665649414 |
sex | M |
site | Butakty 1 settlement |
site_detail | - |
mt_hg | F1b1e |
ychr_hg | - |
year_from | 750 |
year_to | 950 |
date_detail | 1200-1000 BP |
bp | - |
c14_lab_code | - |
c14_sample_tag | - |
c14_layer_tag | True |
avg_coverage | 837.1110229492188 |
sequence_source | bam |
reference | de Barros Damgaard et al. 2018. 137 ancient human genomes from across the Eurasian steppes. Nature, 557(7705), 369-374. (link) |
data_link | https://www.ebi.ac.uk/ena/data/view/PRJEB20658 |
ychr_snps | - |
mitopathos | [{'allele': '16183C', 'position': 16183, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Melanoma patients']}, {'allele': '16189C', 'position': 16189, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Diabetes / Cardiomyopathy /cancer risk / mtDNA copy nbr / Metabolic Syndrome / Melanoma patients']}, {'allele': '6962A', 'position': 6962, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CO1'], 'diseases': ['Possible helper variant for 15927A']}] |