DA231

FASTA

Metadata

Reference

Data

identifier	DA231
alternative_identifiers	['Mitjurino', '24th april 1989']
country	Kazakhstan
continent	Asia
region	Central steppe
culture	Andronovo
epoch	Bronze Age
group	BAKa
comment	-
latitude	52.4908332824707
longitude	76.83944702148438
sex	F
site	Mitjurino, 24th april 1989
site_detail	-
mt_hg	U2e1h
ychr_hg	-
year_from	-1592
year_to	-1591
date_detail	-
bp	3225±43
c14_lab_code	UBA-33602
c14_sample_tag	True
c14_layer_tag	-
avg_coverage	248.302001953125
sequence_source	bam
reference	de Barros Damgaard et al. 2018. 137 ancient human genomes from across the Eurasian steppes. Nature, 557(7705), 369-374. (link)
data_link	https://www.ebi.ac.uk/ena/data/view/PRJEB20658
ychr_snps	-
mitopathos	[{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '14674C', 'position': 14674, 'status': 'Cfrm', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-TE'], 'diseases': ['Reversible COX deficiency myopathy']}, {'allele': '16183C', 'position': 16183, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Melanoma patients']}, {'allele': '228A', 'position': 228, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Low VO2max response']}, {'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}]