DA353
FASTA
Metadata
Reference
Data
| identifier | DA353 |
|---|---|
| alternative_identifiers | ['UID_1989.029'] |
| country | Russia |
| continent | Asia |
| region | Siberia |
| culture | Glazkovo |
| epoch | Bronze Age |
| group | BASI |
| comment | - |
| latitude | 53.18888854980469 |
| longitude | 103.36805725097656 |
| sex | M |
| site | UID_1989.029 |
| site_detail | - |
| mt_hg | A+152+16362+16189 |
| ychr_hg | - |
| year_from | -2647 |
| year_to | -1776 |
| date_detail | 4597-3726 BP |
| bp | - |
| c14_lab_code | - |
| c14_sample_tag | - |
| c14_layer_tag | True |
| avg_coverage | 97.0199966430664 |
| sequence_source | bam |
| reference | de Barros Damgaard et al. 2018. 137 ancient human genomes from across the Eurasian steppes. Nature, 557(7705), 369-374. (link) |
| data_link | https://www.ebi.ac.uk/ena/data/view/PRJEB20658 |
| ychr_snps | - |
| mitopathos | [{'allele': '12705T', 'position': 12705, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CO1'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '150T', 'position': 150, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Longevity / Cervical Carcinoma / HPV infection risk']}, {'allele': '16189C', 'position': 16189, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Diabetes / Cardiomyopathy /cancer risk / mtDNA copy nbr / Metabolic Syndrome / Melanoma patients']}, {'allele': '663G', 'position': 663, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-RNR1'], 'diseases': ['Coronary atherosclerosis risk']}, {'allele': '8078A', 'position': 8078, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CO2'], 'diseases': ['DEAF']}] |
DA353
