DA49
FASTA
Metadata
Reference
Data
| identifier | DA49 |
|---|---|
| alternative_identifiers | ['Kyr 17'] |
| country | Kazakhstan |
| continent | Asia |
| region | Tian Shan |
| culture | Saka |
| epoch | Iron Age |
| group | IAKa |
| comment | TianShanSaka |
| latitude | 41.42805480957031 |
| longitude | 75.32971954345703 |
| sex | M |
| site | Kurgan nr. K45, Keden |
| site_detail | - |
| mt_hg | T2a1 |
| ychr_hg | R1 |
| year_from | -356 |
| year_to | -285 |
| date_detail | - |
| bp | 2186±35 |
| c14_lab_code | UBA-31158 |
| c14_sample_tag | True |
| c14_layer_tag | - |
| avg_coverage | 762.375 |
| sequence_source | bam |
| reference | de Barros Damgaard et al. 2018. 137 ancient human genomes from across the Eurasian steppes. Nature, 557(7705), 369-374. (link) |
| data_link | https://www.ebi.ac.uk/ena/data/view/PRJEB20658 |
| ychr_snps | - |
| mitopathos | [{'allele': '11251G', 'position': 11251, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-ND4'], 'diseases': ['Reduced risk of PD']}, {'allele': '10398G', 'position': 10398, 'status': 'Reported / lineage L & M marker / also hg IJK', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND3'], 'diseases': ['PD protective factor / longevity / altered cell pH / metabolic syndrome / breast cancer risk / Leigh Syndrome risk / ADHD / cognitive decline / SCA2 age of onset / Fuchs endothelial corneal dystrophy']}, {'allele': '14687G', 'position': 14687, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-TE'], 'diseases': ['Mito myopathy w respiratory failure / intellectual disability']}, {'allele': '15928A', 'position': 15928, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-TT'], 'diseases': ['Multiple Sclerosis / idiopathic repeat miscarriage / AD protection']}, {'allele': '4917G', 'position': 4917, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND2'], 'diseases': ['LHON / Insulin Resistance / AMD / NRTI-PN']}] |
DA49
