DA8

FASTA

Metadata

Reference

Data

identifier DA8
alternative_identifiers ['St.Pet. 69']
country Russia
continent Asia
region Siberia
culture Tagar
epoch Iron Age
group IASI
comment -
latitude 54.67583465576172
longitude 90.8536148071289
sex F
site Grishkin Log 1
site_detail -
mt_hg U2e1h
ychr_hg -
year_from -900
year_to -600
date_detail 900-600 BCE
bp -
c14_lab_code -
c14_sample_tag -
c14_layer_tag True
avg_coverage 473.9580078125
sequence_source bam
reference de Barros Damgaard et al. 2018. 137 ancient human genomes from across the Eurasian steppes. Nature, 557(7705), 369-374. (link)
data_link https://www.ebi.ac.uk/ena/data/view/PRJEB20658
ychr_snps -
mitopathos [{'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '5703A', 'position': 5703, 'status': 'Cfrm', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-TN'], 'diseases': ['CPEO / MM']}, {'allele': '7497A', 'position': 7497, 'status': 'Cfrm', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TS1'], 'diseases': ['MM / EXIT']}]