DA82
FASTA
Metadata
Reference
Data
| identifier | DA82 |
|---|---|
| alternative_identifiers | ['Kyr 50'] |
| country | Kazakhstan |
| continent | Asia |
| region | Tian Shan |
| culture | Hun |
| epoch | Iron Age |
| group | IAKa |
| comment | TianShanHun |
| latitude | 41.6150016784668 |
| longitude | 74.98583221435547 |
| sex | F |
| site | Kurgan nr. 4, Japyryk |
| site_detail | - |
| mt_hg | K2a5 |
| ychr_hg | - |
| year_from | 83 |
| year_to | 177 |
| date_detail | - |
| bp | 1867±46 |
| c14_lab_code | UBA-31202 |
| c14_sample_tag | True |
| c14_layer_tag | - |
| avg_coverage | 1269.219970703125 |
| sequence_source | bam |
| reference | de Barros Damgaard et al. 2018. 137 ancient human genomes from across the Eurasian steppes. Nature, 557(7705), 369-374. (link) |
| data_link | https://www.ebi.ac.uk/ena/data/view/PRJEB20658 |
| ychr_snps | - |
| mitopathos | [{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '146C', 'position': 146, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Absence of Endometriosis']}, {'allele': '16093C', 'position': 16093, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Cyclic Vomiting Syndrome']}, {'allele': '9055A', 'position': 9055, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ATP6'], 'diseases': ['PD protective factor']}] |
DA82
