Donkalnis7

FASTA

Metadata

Reference

Data

identifier Donkalnis7
alternative_identifiers -
country Lithuania
continent Europe
region Baltic
culture Narva
epoch Mesolithic
group HGN
comment -
latitude 55.80799865722656
longitude 22.422000885009766
sex M
site Donkalnis, Lithuania
site_detail grave 1
mt_hg U5a2d1
ychr_hg R1
year_from -5460
year_to -4940
date_detail 5460–4940 calBCE
bp 6220±90
c14_lab_code Poz-61576
c14_sample_tag True
c14_layer_tag -
avg_coverage 0.7580000162124634
sequence_source fasta
reference Mittnik et al. 2018. The genetic prehistory of the Baltic Sea region. Nature Communications, 9(1), ?. (link)
data_link https://www.ncbi.nlm.nih.gov/nuccore/MG429001.1
ychr_snps -
mitopathos [{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '16270T', 'position': 16270, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-CR'], 'diseases': ['Melanoma patients']}]