F38
FASTA
Metadata
Reference
Data
identifier | F38 |
---|---|
alternative_identifiers | ['HAS70', 'F38.SG'] |
country | Iran |
continent | Asia |
region | Middle East |
culture | Iran_IA |
epoch | Iron Age |
group | IAME |
comment | - |
latitude | 37.00453567504883 |
longitude | 45.458656311035156 |
sex | M |
site | Tepe Hasanlu, Northen Zagros |
site_detail | - |
mt_hg | N1a3a |
ychr_hg | R1b1a1a2a2 |
year_from | -971 |
year_to | -832 |
date_detail | 971-832 calBCE (2753±21 BP, MAMS-22352) |
bp | 2753±21 |
c14_lab_code | MAMS-22352 |
c14_sample_tag | True |
c14_layer_tag | - |
avg_coverage | - |
sequence_source | fasta |
reference | Broushaki et al. 2016. Early Neolithic genomes from the eastern Fertile Crescent. Science, 353(6298), 499-503. (link) |
data_link | https://www.ncbi.nlm.nih.gov/nuccore/KX353761.1 |
ychr_snps | - |
mitopathos | [{'allele': '12705T', 'position': 12705, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CO1'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '13637G', 'position': 13637, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Possible LHON factor']}, {'allele': '195C', 'position': 195, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['BD-associated / melanoma pts']}, {'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '4491A', 'position': 4491, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND2'], 'diseases': ['High altitude pulmonary edema susceptibility']}, {'allele': '5567C', 'position': 5567, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-TW'], 'diseases': ['Myopathy']}] |
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F38