F38

FASTA

Metadata

Reference

Data

identifier	F38
alternative_identifiers	['HAS70', 'F38.SG']
country	Iran
continent	Asia
region	Middle East
culture	Iran_IA
epoch	Iron Age
group	IAME
comment	-
latitude	37.00453567504883
longitude	45.458656311035156
sex	M
site	Tepe Hasanlu, Northen Zagros
site_detail	-
mt_hg	N1a3a
ychr_hg	R1b1a1a2a2
year_from	-971
year_to	-832
date_detail	971-832 calBCE (2753±21 BP, MAMS-22352)
bp	2753±21
c14_lab_code	MAMS-22352
c14_sample_tag	True
c14_layer_tag	-
avg_coverage	-
sequence_source	fasta
reference	Broushaki et al. 2016. Early Neolithic genomes from the eastern Fertile Crescent. Science, 353(6298), 499-503. (link)
data_link	https://www.ncbi.nlm.nih.gov/nuccore/KX353761.1
ychr_snps	-
mitopathos	[{'allele': '12705T', 'position': 12705, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CO1'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '13637G', 'position': 13637, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Possible LHON factor']}, {'allele': '195C', 'position': 195, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['BD-associated / melanoma pts']}, {'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '4491A', 'position': 4491, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND2'], 'diseases': ['High altitude pulmonary edema susceptibility']}, {'allele': '5567C', 'position': 5567, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-TW'], 'diseases': ['Myopathy']}]