Gyvakarai1
FASTA
Metadata
Reference
Data
identifier | Gyvakarai1 |
---|---|
alternative_identifiers | - |
country | Lithuania |
continent | Europe |
region | Baltic |
culture | Corded Ware/Battle Axe |
epoch | Neolithic |
group | CWC |
comment | Late Neolithic |
latitude | 55.917999267578125 |
longitude | 24.913000106811523 |
sex | M |
site | Gyvakarai, Lithuania |
site_detail | grave 1 |
mt_hg | K1b2a |
ychr_hg | R1a1a1b |
year_from | -2690 |
year_to | -2470 |
date_detail | 2620–2470 calBCE |
bp | 4030±30 |
c14_lab_code | Poz-61584 |
c14_sample_tag | True |
c14_layer_tag | - |
avg_coverage | 7.559000015258789 |
sequence_source | fasta |
reference | Mittnik et al. 2018. The genetic prehistory of the Baltic Sea region. Nature Communications, 9(1), ?. (link) |
data_link | https://www.ncbi.nlm.nih.gov/nuccore/MG429024.1 |
ychr_snps | - |
mitopathos | [{'allele': '10398G', 'position': 10398, 'status': 'Reported / lineage L & M marker / also hg IJK', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND3'], 'diseases': ['PD protective factor / longevity / altered cell pH / metabolic syndrome / breast cancer risk / Leigh Syndrome risk / ADHD / cognitive decline / SCA2 age of onset / Fuchs endothelial corneal dystrophy']}, {'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '146C', 'position': 146, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Absence of Endometriosis']}, {'allele': '195C', 'position': 195, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['BD-associated / melanoma pts']}, {'allele': '5913A', 'position': 5913, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CO1'], 'diseases': ['Prostate Cancer / hypertension']}, {'allele': '9055A', 'position': 9055, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ATP6'], 'diseases': ['PD protective factor']}] |
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Gyvakarai1