| identifier |
I0015 |
| alternative_identifiers |
['Motala6'] |
| country |
Sweden |
| continent |
Europe |
| region |
Scandinavia |
| culture |
Motala_HG |
| epoch |
Mesolithic |
| group |
HGN |
| comment |
- |
| latitude |
58.540000915527344 |
| longitude |
15.050000190734863 |
| sex |
M |
| site |
Motala, Kanaljorden |
| site_detail |
- |
| mt_hg |
U5a2d |
| ychr_hg |
I2a1 |
| year_from |
-5964 |
| year_to |
-5629 |
| date_detail |
5964-5629 calBCE (6863±75 BP, Ua-42120) |
| bp |
6863±75 |
| c14_lab_code |
Ua-42120 |
| c14_sample_tag |
True |
| c14_layer_tag |
- |
| avg_coverage |
- |
| sequence_source |
bam |
| reference |
Haak et al. 2015. Massive migration from the steppe was a source for Indo-European languages in Europe. Nature, 522(7555), 207-211.
(link)
|
| data_link |
https://www.ebi.ac.uk/ena/data/view/PRJEB8448
|
| ychr_snps |
['I2:M438:16638804A->G', 'I:CTS2514:14337364T->C', 'I:CTS4273:15536870C->T', 'I:CTS6265:16780748C->G', 'I:CTS7831:17692855T->A', 'I:CTS11540:23156725C->T', 'I:FGC2415:13835003T->C', 'I:FI2:8382265C->G', 'I:L503:21359407C->G', 'I:L578:8267857G->A', 'I:L758:8536868C->G', 'I:L846:7856500C->T', 'I:PF3627.2:6662712C->T', 'I:PF3640:7681156T->A', 'I:PF3641:7688470T->C', 'I:PF3660:8466652G->A', 'I:PF3665:8643763A->G', 'I:PF3794:21067903C->T', 'I:PF3833:22485425A->T', 'I:Z16987:22243817A->Ghet', 'I:FI4:8873160G->T', 'I2:PF3664:8567995G->A', 'I:CTS3517:14986989T->G', 'I:CTS8876:18257568G->A', 'I:FGC2416:7642823G->T', 'I:FGC7049:22459264G->A', 'I:L41:19048602G->A', 'I:L772:15615533C->A', 'I:P38:14484379A->C', 'I:P212:3545070T->A', 'I:PF3814:21839183A->G', 'I:PF3817:21939618G->A', 'I:PF3836:22525421T->G', 'I2a1:P37.2:14491684T->C', 'I2a:L460:7879415A->C', 'I2:L68:18700150C->T', 'I:CTS646:6926038T->A', 'I:CTS4848:15862842C->T', 'I:CTS4982:15937959C->T', 'I:CTS7540:17525137A->G', 'I:CTS7593:17548890G->A', 'I:CTS8333:17940414G->A', 'I:CTS9838:19097563T->C', 'I:FI3:8485677C->A', 'I:L844.1:2884029T->C', 'I:PF3742:16354708G->A']
|
| mitopathos |
[{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '16192T', 'position': 16192, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-CR'], 'diseases': ['Melanoma patients']}, {'allele': '16270T', 'position': 16270, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-CR'], 'diseases': ['Melanoma patients']}, {'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '6480A', 'position': 6480, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CO1'], 'diseases': ['Prostate Cancer / enriched in POAG cohort']}]
|