I0025
FASTA
Metadata
Reference
Data
| identifier | I0025 |
|---|---|
| alternative_identifiers | ['LBK1992'] |
| country | Germany |
| continent | Europe |
| region | central Europe |
| culture | Linear Pottery |
| epoch | Neolithic |
| group | LBK |
| comment | - |
| latitude | 48.779998779296875 |
| longitude | 9.180000305175781 |
| sex | F |
| site | Viesenhaeuser Hof, Stuttgart-Muehlhausen |
| site_detail | - |
| mt_hg | T2b |
| ychr_hg | - |
| year_from | -5500 |
| year_to | -4850 |
| date_detail | 5500-4850 BCE |
| bp | - |
| c14_lab_code | - |
| c14_sample_tag | - |
| c14_layer_tag | - |
| avg_coverage | - |
| sequence_source | bam |
| reference | Haak et al. 2015. Massive migration from the steppe was a source for Indo-European languages in Europe. Nature, 522(7555), 207-211. (link) |
| data_link | https://www.ebi.ac.uk/ena/data/view/PRJEB8448 |
| ychr_snps | - |
| mitopathos | [{'allele': '11251G', 'position': 11251, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-ND4'], 'diseases': ['Reduced risk of PD']}, {'allele': '15928A', 'position': 15928, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-TT'], 'diseases': ['Multiple Sclerosis / idiopathic repeat miscarriage / AD protection']}, {'allele': '4216C', 'position': 4216, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND1'], 'diseases': ['LHON / Insulin Resistance /possible adaptive high altitude variant / miscarriage']}, {'allele': '4917G', 'position': 4917, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND2'], 'diseases': ['LHON / Insulin Resistance / AMD / NRTI-PN']}] |
I0025
