I0103

FASTA

Metadata

Reference

Data

identifier I0103
alternative_identifiers ['ESP16']
country Germany
continent Europe
region central Europe
culture Corded Ware
epoch Neolithic
group CWC
comment -
latitude 51.41999816894531
longitude 11.680000305175781
sex F
site Esperstedt
site_detail -
mt_hg W6a
ychr_hg -
year_from -2578
year_to -2468
date_detail 2578-2468 calBCE (4000±31 BP, MAMS-21488)
bp 4000±31
c14_lab_code MAMS-21488
c14_sample_tag True
c14_layer_tag -
avg_coverage -
sequence_source bam
reference Haak et al. 2015. Massive migration from the steppe was a source for Indo-European languages in Europe. Nature, 522(7555), 207-211. (link)
data_link https://www.ebi.ac.uk/ena/data/view/PRJEB8448
ychr_snps -
mitopathos [{'allele': '12705T', 'position': 12705, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CO1'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '16192T', 'position': 16192, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-CR'], 'diseases': ['Melanoma patients']}, {'allele': '195C', 'position': 195, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['BD-associated / melanoma pts']}, {'allele': '5460A', 'position': 5460, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-ND2'], 'diseases': ['AD / PD / LHON']}]