I0126
FASTA
Metadata
Reference
Data
| identifier | I0126 |
|---|---|
| alternative_identifiers | ['SVP51'] |
| country | Russia |
| continent | Europe |
| region | Pontic steppe |
| culture | Poltavka |
| epoch | Bronze Age |
| group | BARu |
| comment | - |
| latitude | 53.310001373291016 |
| longitude | 51.150001525878906 |
| sex | M |
| site | Kutuluk, Kutuluk River, Samara |
| site_detail | Site III |
| mt_hg | H6a2 |
| ychr_hg | R1b1a1a2a2 |
| year_from | -2867 |
| year_to | -2486 |
| date_detail | 2867-2486 calBCE (4081±54 BP, AA-53803) |
| bp | 4081±54 |
| c14_lab_code | AA-53803 |
| c14_sample_tag | True |
| c14_layer_tag | - |
| avg_coverage | - |
| sequence_source | bam |
| reference | Mathieson et al. 2015. Genome-wide patterns of selection in 230 ancient Eurasians. Nature, 528(7583), 499-503. (link) |
| data_link | https://www.ebi.ac.uk/ena/data/view/PRJEB11450 |
| ychr_snps | ['R1:P245:8633545T->C', 'R:CTS2426:14300457G->A', 'R:F82:7548900G->A', 'R1b1a1a2:L150.1:10008791C->T', 'R1b1a:L754:22889018G->A', 'R1:CTS3321:14829196C->T', 'R:L1225:22733758C->G', 'R:M207:15581983A->G', 'R:M734:18066156C->T', 'R:P227:21409706G->C', 'R1b1a1a:CTS7904:17732408T->C', 'R1b1a1a2:L265:8149348A->G', 'R1b1a1a2:L773:7220727A->G', 'R1b1a1a2:PF6475:17986687C->A', 'R1b1a1a:FGC57:7759944G->A', 'R1b1a1a:PF6463:16183412C->A', 'R1b1a:A702:10038192G->A', 'R1b1a1a2a2:Z2105:15747432C->A', 'R1b1a1a2:PF6494:20811307G->A', 'R1b1a1a2:PF6507:21983827C->T', 'R1b1:CTS2229:14226692T->A'] |
| mitopathos | [{'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}] |