I0361
FASTA
Metadata
Reference
Data
| identifier | I0361 |
|---|---|
| alternative_identifiers | ['SVP9'] |
| country | Russia |
| continent | Europe |
| region | Pontic steppe |
| culture | Srubnaya |
| epoch | Bronze Age |
| group | SRU |
| comment | - |
| latitude | 53.029998779296875 |
| longitude | 50.38999938964844 |
| sex | M |
| site | Spiridonovka IV, Samara River, Samara |
| site_detail | - |
| mt_hg | H5b |
| ychr_hg | R1a1a |
| year_from | -1850 |
| year_to | -1200 |
| date_detail | 1850-1200 BCE |
| bp | - |
| c14_lab_code | - |
| c14_sample_tag | - |
| c14_layer_tag | - |
| avg_coverage | - |
| sequence_source | bam |
| reference | Mathieson et al. 2015. Genome-wide patterns of selection in 230 ancient Eurasians. Nature, 528(7583), 499-503. (link) |
| data_link | https://www.ebi.ac.uk/ena/data/view/PRJEB11450 |
| ychr_snps | ['R1a1a:L168:16202177A->G', 'R:L1347:22818334C->T', 'R1:L875:16742224A->G', 'R1:P286:17716251C->T', 'R:F82:7548900G->A', 'R1:P234:21117888T->C', 'R:P224:17285993C->T', 'R1a:L145:14138745C->A', 'R:M734:18066156C->T'] |
| mitopathos | [{'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}] |
I0361
