I0361

FASTA

Metadata

Reference

Data

identifier I0361
alternative_identifiers ['SVP9']
country Russia
continent Europe
region Pontic steppe
culture Srubnaya
epoch Bronze Age
group SRU
comment -
latitude 53.029998779296875
longitude 50.38999938964844
sex M
site Spiridonovka IV, Samara River, Samara
site_detail -
mt_hg H5b
ychr_hg R1a1a
year_from -1850
year_to -1200
date_detail 1850-1200 BCE
bp -
c14_lab_code -
c14_sample_tag -
c14_layer_tag -
avg_coverage -
sequence_source bam
reference Mathieson et al. 2015. Genome-wide patterns of selection in 230 ancient Eurasians. Nature, 528(7583), 499-503. (link)
data_link https://www.ebi.ac.uk/ena/data/view/PRJEB11450
ychr_snps ['R1a1a:L168:16202177A->G', 'R:L1347:22818334C->T', 'R1:L875:16742224A->G', 'R1:P286:17716251C->T', 'R:F82:7548900G->A', 'R1:P234:21117888T->C', 'R:P224:17285993C->T', 'R1a:L145:14138745C->A', 'R:M734:18066156C->T']
mitopathos [{'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}]