I0406

FASTA

Metadata

Reference

Data

identifier	I0406
alternative_identifiers	['Mina4', 'STANKOa']
country	Spain
continent	Europe
region	Iberia
culture	Iberia_MN
epoch	Neolithic
group	NEIB
comment	-
latitude	41.25
longitude	-2.3299999237060547
sex	M
site	La Mina
site_detail	-
mt_hg	H1
ychr_hg	I2a2a1b2
year_from	-3900
year_to	-3600
date_detail	3900-3600 BCE
bp	-
c14_lab_code	-
c14_sample_tag	-
c14_layer_tag	-
avg_coverage	527.0985717773438
sequence_source	bam
reference	Haak et al. 2015. Massive migration from the steppe was a source for Indo-European languages in Europe. Nature, 522(7555), 207-211. (link)
data_link	https://www.ebi.ac.uk/ena/data/view/PRJEB8448
ychr_snps	['I2:M438:16638804A->G', 'I:CTS1800:14073053G->A', 'I:CTS2193:14214481G->T', 'I:CTS2387:14286853T->C', 'I:CTS2514:14337364T->C', 'I:CTS4209:15479899T->A', 'I:CTS6265:16780748C->G', 'I:CTS7831:17692855T->A', 'I:CTS8420:18018313C->A', 'I:FGC2412:21689728A->G', 'I:FGC2413:8262092C->T', 'I:FGC2415:13835003T->C', 'I:L503:21359407C->G', 'I:L578:8267857G->A', 'I:L758:8536868C->G', 'I:L1197:14974451C->T', 'I:PF3627.2:6662712C->T', 'I:PF3640:7681156T->A', 'I:PF3641:7688470T->C', 'I:PF3833:22485425A->T', 'I:Z16987:22243817A->Ghet', 'I:CTS6231:16751000C->T', 'I:FI4:8873160G->T', 'I:M258:15023364T->C', 'I2:PF3664:8567995G->A', 'I:CTS3517:14986989T->G', 'I:CTS6497:16939794A->T', 'I:CTS8876:18257568G->A', 'I:CTS9860:19104986G->A', 'I:CTS11441:23113271C->G', 'I:L41:19048602G->A', 'I:P38:14484379A->C', 'I:P212:3545070T->A', 'I:PF3806:21525069G->A', 'I:PF3814:21839183A->G', 'I:PF3836:22525421T->G', 'I2a:L460:7879415A->C', 'I2:L68:18700150C->T', 'I:CTS7540:17525137A->G', 'I:L844.1:2884029T->C', 'I:PF3742:16354708G->A', 'I:CTS5650:16415916A->G', 'I:PF3837:22573702G->A', 'I:CTS8545:18078759T->A', 'I:L755:8465165C->T', 'I2a2a1:CTS9183:18732197A->G', 'I2a2a:L34:7716262A->C', 'I2a2a:P222:18888200C->G', 'I2a2:P217:7628484C->T', 'I:FGC2411:9900057A->G', 'I:PF3654:8278628T->C', 'I2a2:L35:22725379C->A', 'I2a2:L368:6931594C->T', 'I2a2a:P223:16699334C->G', 'I2a2a:P220:24475669G->T', 'I2a2a:P221:8353707C->A', 'I2a2:L37:17516123T->C', 'I2a2:L181:19077754G->T', 'I2a2a1b2:Z161:2696497C->G', 'I2a2a:M223:21717307G->A', 'I2a2:P218:17493630T->Ghet']
mitopathos	-