I0444

FASTA

Metadata

Reference

Data

identifier	I0444
alternative_identifiers	['SVP58']
country	Russia
continent	Europe
region	Pontic steppe
culture	Yamnaya
epoch	Bronze Age
group	YAM
comment	-
latitude	53.310001373291016
longitude	51.150001525878906
sex	M
site	Kutuluk, Kutuluk River, Samara
site_detail	Site III
mt_hg	H6a1b
ychr_hg	R1b1a1a2
year_from	-3335
year_to	-2882
date_detail	3335-2882 calBCE (4370±75 BP, AA-12570)
bp	4370±75
c14_lab_code	AA-12570
c14_sample_tag	True
c14_layer_tag	-
avg_coverage	-
sequence_source	bam
reference	Haak et al. 2015. Massive migration from the steppe was a source for Indo-European languages in Europe. Nature, 522(7555), 207-211. (link)
data_link	https://www.ebi.ac.uk/ena/data/view/PRJEB8448
ychr_snps	['R:F459:18017528G->T', 'R:M613:7133986G->C', 'R1:L875:16742224A->G', 'R1:P231:9989615A->Ghet', 'R:CTS8311:17930099C->A', 'R:M718:17334694G->T', 'R1b1a1a2:L150.1:10008791C->T', 'R1b1a:FGC36:13822833G->T', 'R1b1a:L761:16773870A->G', 'R1:CTS3321:14829196C->T', 'R1:CTS997:7132713G->A', 'R1:P233:21166358T->G', 'R1:P238:7771131G->A', 'R1:P242:7647357G->A', 'R:F33:6701239G->A', 'R:F295:15594523A->G', 'R:F356:16629782T->C', 'R:F652:23631629C->A', 'R:FGC1168:15667208G->C', 'R:L1225:22733758C->G', 'R:M734:18066156C->T', 'R1b1a1a:CTS5082:16005138A->C', 'R1b1a1a:CTS7904:17732408T->C', 'R1b1a1a:L502:19020340G->C', 'R1b1a:L1068:21528257T->C', 'R1b1a1a2:CTS11468:23124367G->T', 'R1b1a1a2:L265:8149348A->G', 'R1b1a1a2:L500:18180446C->A', 'R1b1a1a2:L773:7220727A->G', 'R1b1a1a2:PF6475:17986687C->A', 'R1b1a1a:FGC57:7759944G->A', 'R1b1a:CTS7585:17545608G->T', 'R1b1a:PF6263:21159055C->A', 'R1b1:M415:9170545C->A', 'R1b1a1a2:PF6409:4352151G->A', 'R1b1a1a2:PF6497:21222868C->G', 'R1b1a1a:PF6498:21312064C->A', 'R1b1a1a2:PF6432:8194310C->A', 'R1b1a1a2:CTS8665:18137831T->C']
mitopathos	[{'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}]