I0460

FASTA

Metadata

Reference

Data

identifier I0460
alternative_identifiers ['Roy3']
country Spain
continent Europe
region Iberia
culture Bell Beaker
epoch Copper Age
group BBC
comment -
latitude 42.400001525878906
longitude -3.75
sex M
site Arroyal I, Burgos
site_detail -
mt_hg H45
ychr_hg I2a2a
year_from -2460
year_to -2209
date_detail 2460-2209 calBCE (3860±30 BP, UGA-15905)
bp 3860±30
c14_lab_code UGA-15905
c14_sample_tag True
c14_layer_tag -
avg_coverage 240.61399841308594
sequence_source bam
reference Olalde et al. 2018. The Beaker phenomenon and the genomic transformation of northwest Europe. Nature, 555(7695), 190-196. (link)
data_link http://www.ebi.ac.uk/ena/data/view/PRJEB23635
ychr_snps -
mitopathos [{'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '8843C', 'position': 8843, 'status': 'Reported as Likely Benign', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ATP6'], 'diseases': ['Patient with suspected mitochondrial disease']}]