I0795

FASTA

Metadata

Reference

Data

identifier I0795
alternative_identifiers ['KAR6']
country Germany
continent Europe
region central Europe
culture Linear Pottery
epoch Neolithic
group LBK
comment -
latitude 51.279998779296875
longitude 11.649999618530273
sex M
site Karsdorf
site_detail -
mt_hg H1 or H1au1b
ychr_hg CT
year_from -5217
year_to -5041
date_detail 5217-5041 calBCE (6174±29 BP, MAMS-22823)
bp 6174±29
c14_lab_code MAMS-22823
c14_sample_tag True
c14_layer_tag -
avg_coverage -
sequence_source bam
reference Haak et al. 2015. Massive migration from the steppe was a source for Indo-European languages in Europe. Nature, 522(7555), 207-211. (link)
data_link https://www.ebi.ac.uk/ena/data/view/PRJEB8448
ychr_snps ['CT:CTS1217:7275087C->T', 'CT:CTS9722:19039750G->C', 'CT:FGC24501:22529475C->G', 'CT:FGC33852:17975155G->T', 'CT:M5613:7796647C->T', 'CT:M5622:8080397T->A', 'CT:M5640:8867489T->C', 'CT:M5716:17301733T->C', 'CT:M5778:21281606G->C', 'CT:Z17706:9989244G->T']
mitopathos [{'allele': '3010A', 'position': 3010, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-RNR2'], 'diseases': ['Cyclic Vomiting Syndrome with Migraine / high altitude disease risk factor']}, {'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}]