I0840
FASTA
Metadata
Reference
Data
| identifier | I0840 |
|---|---|
| alternative_identifiers | ['AMD2-G18-187'] |
| country | Portugal |
| continent | Europe |
| region | Iberia |
| culture | Bell Beaker |
| epoch | Copper Age |
| group | BBC |
| comment | - |
| latitude | 39.5 |
| longitude | -8.616666793823242 |
| sex | F |
| site | Galeria da Cisterna, Almonda |
| site_detail | - |
| mt_hg | U5b1i |
| ychr_hg | - |
| year_from | -2455 |
| year_to | -2200 |
| date_detail | 2455-2200 calBCE (3836±29 BP, OxA-28857) |
| bp | 3836±29 |
| c14_lab_code | OxA-28857 |
| c14_sample_tag | True |
| c14_layer_tag | - |
| avg_coverage | 6.9581098556518555 |
| sequence_source | bam |
| reference | Olalde et al. 2018. The Beaker phenomenon and the genomic transformation of northwest Europe. Nature, 555(7695), 190-196. (link) |
| data_link | http://www.ebi.ac.uk/ena/data/view/PRJEB23635 |
| ychr_snps | - |
| mitopathos | [{'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '16270T', 'position': 16270, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-CR'], 'diseases': ['Melanoma patients']}] |