I1154
FASTA
Metadata
Reference
Data
| identifier | I1154 |
|---|---|
| alternative_identifiers | - |
| country | Israel |
| continent | Asia |
| region | Near East |
| culture | Levant_ChL |
| epoch | Copper Age |
| group | CANE |
| comment | Chalcolithic |
| latitude | 32.977108001708984 |
| longitude | 35.337562561035156 |
| sex | F |
| site | Peqi'in Cave |
| site_detail | - |
| mt_hg | T2g1a |
| ychr_hg | - |
| year_from | -4500 |
| year_to | -3900 |
| date_detail | 4500–3900 BCE |
| bp | - |
| c14_lab_code | - |
| c14_sample_tag | - |
| c14_layer_tag | - |
| avg_coverage | 0.05000000074505806 |
| sequence_source | <NA> |
| reference | Harney et al. 2018. Ancient DNA from Chalcolithic Israel reveals the role of population mixture in cultural transformation. Nature Communications, 9(1), ?. (link) |
| data_link | https://www.ebi.ac.uk/ena/data/view/SAMEA4843645 |
| ychr_snps | - |
| mitopathos | [{'allele': '11251G', 'position': 11251, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-ND4'], 'diseases': ['Reduced risk of PD']}, {'allele': '4216C', 'position': 4216, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND1'], 'diseases': ['LHON / Insulin Resistance /possible adaptive high altitude variant / miscarriage']}, {'allele': '4917G', 'position': 4917, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND2'], 'diseases': ['LHON / Insulin Resistance / AMD / NRTI-PN']}] |