I1177

FASTA

Metadata

Reference

Data

identifier I1177
alternative_identifiers -
country Israel
continent Asia
region Near East
culture Levant_ChL
epoch Copper Age
group CANE
comment Chalcolithic
latitude 32.977108001708984
longitude 35.337562561035156
sex F
site Peqi'in Cave
site_detail -
mt_hg N1b1
ychr_hg -
year_from -4500
year_to -3900
date_detail 4500–3900 BCE
bp -
c14_lab_code -
c14_sample_tag -
c14_layer_tag -
avg_coverage 0.09000000357627869
sequence_source <NA>
reference Harney et al. 2018. Ancient DNA from Chalcolithic Israel reveals the role of population mixture in cultural transformation. Nature Communications, 9(1), ?. (link)
data_link https://www.ebi.ac.uk/ena/data/view/SAMEA4843647
ychr_snps -
mitopathos [{'allele': '12705T', 'position': 12705, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CO1'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '8836G', 'position': 8836, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ATP6'], 'diseases': ['LHON']}]