I1276

FASTA

Metadata

Reference

Data

identifier I1276
alternative_identifiers ['MIR13', 'inv. 6204/4;StPet4']
country Spain
continent Europe
region Iberia
culture Iberia_Chalcolithic
epoch Copper Age
group CAIB
comment -
latitude 42.33000183105469
longitude -3.5
sex F
site El Mirador Cave, Atapuerca, Burgos
site_detail -
mt_hg H3c3
ychr_hg -
year_from -3363
year_to -1903
date_detail 3363-1903 BCE [other dates used in the Bayesian modeling analysis we used to obtain this range are (3950±30 BP, Beta-416457), 2857-2496 calBCE (4080±30 BP, Beta-416456), 2865-2575 calBCE (4110±30 BP, Beta-416458), 2900-2679 calBCE (4210±30 BP, Beta-416455), based on dates of other El Mirador samples)
bp -
c14_lab_code -
c14_sample_tag -
c14_layer_tag True
avg_coverage 365.0
sequence_source bam
reference Mathieson et al. 2015. Genome-wide patterns of selection in 230 ancient Eurasians. Nature, 528(7583), 499-503. (link)
data_link https://www.ebi.ac.uk/ena/data/view/PRJEB11450
ychr_snps ['I2a2a1b1b:L699:2663920A->G;I2a2a1b1:L702:7629205C->T;I2a2a1b:CTS10057:19232160C->T;I2a2a1b:CTS10100:19255890G->A;I2a2a1:CTS9183:18732197A->G;I2a2:L368:6931594C->Thet;I2a2:L37:17516123T->C;I2a2:P218:17493630T->G;I2:PF3664:8567995G->A;I:CTS10058:19233673A->G;I:CTS10941:22845794A->G;I:CTS1800:14073053G->A;I:CTS2514:14337364T->C;I:CTS4088:15389836T->C;I:CTS4209:15479899T->A;I:CTS5908:16548548G->A;I:CTS6265:16780748C->G;I:CTS674:6943522C->T;I:CTS7469:17497181C->A;I:CTS7502:17511797A->G;I:CTS7593:17548890G->A;I:CTS7831:17692855T->A;I:CTS8420:18018313C->A;I:CTS88:2723755G->A;I:FGC2412:21689728A->Ghet;I:FGC2413:8262092C->T;I:FGC2415:13835003T->C;I:FI2:8382265C->G;I:FI3:8485677C->A;I:FI4:8873160G->T;I:L41:19048602G->A;I:L503:21359407C->G;I:L578:8267857G->A;I:L758:8536868C->G;I:L846:7856500C->T;I:PF3640:7681156T->A;I:PF3641:7688470T->C;I:PF3660:8466652G->A;I:PF3665:8643763A->G;I:PF3742:16354708G->A;I:PF3794:21067903C->T;I:PF3836:22525421T->G;I:PF3837:22573702G->A']
mitopathos -