I1300
FASTA
Metadata
Reference
Data
identifier | I1300 |
---|---|
alternative_identifiers | ['MIR22', 'inv. 6462/25'] |
country | Spain |
continent | Europe |
region | Iberia |
culture | Iberia_Chalcolithic |
epoch | Copper Age |
group | CAIB |
comment | - |
latitude | 42.33000183105469 |
longitude | -3.5 |
sex | F |
site | El Mirador Cave, Atapuerca, Burgos |
site_detail | - |
mt_hg | K1a2a |
ychr_hg | - |
year_from | -3363 |
year_to | -1903 |
date_detail | 3363-1903 BCE [other dates used in the Bayesian modeling analysis we used to obtain this range are (3950±30 BP, Beta-416457), 2857-2496 calBCE (4080±30 BP, Beta-416456), 2865-2575 calBCE (4110±30 BP, Beta-416458), 2900-2679 calBCE (4210±30 BP, Beta-416455), based on dates of other El Mirador samples) |
bp | - |
c14_lab_code | - |
c14_sample_tag | - |
c14_layer_tag | True |
avg_coverage | 726.0 |
sequence_source | bam |
reference | Mathieson et al. 2015. Genome-wide patterns of selection in 230 ancient Eurasians. Nature, 528(7583), 499-503. (link) |
data_link | https://www.ebi.ac.uk/ena/data/view/PRJEB11450 |
ychr_snps | ['R1a:L145:14138745C->A;R1a:L146:23473201T->A;R1a:L62:17891241A->G;R1a:L63:18162834T->C;R1:CTS2565:14366723C->T;R1:CTS3123:14674176A->C;R1:CTS3321:14829196C->T;R1:CTS5611:16394489T->G;R1:CTS997:7132713G->A;R1:L875:16742224A->G;R1:P231:9989615A->G;R1:P233:21166358T->G;R1:P236:17782178C->G;R1:P294:7570822G->C;R:CTS207:2810583A->G;R:CTS3622:15078469C->G;R:CTS6417:16882568T->C;R:CTS7880:17723850C->T;R:CTS8311:17930099C->A;R:F154:8558505T->C;R:F33:6701239G->A;R:F459:18017528G->T;R:F63:7177189G->A;R:F652:23631629C->A;R:F82:7548900G->A;R:FGC1168:15667208G->C;R:L1225:22733758C->G;R:L1347:22818334C->T;R:M651:9889199G->A;R:M718:17334694G->T;R:M734:18066156C->T;R:M760:21219443A->G;R:P227:21409706G->C'] |
mitopathos | - |
I1300