I1303

FASTA

Metadata

Reference

Data

identifier	I1303
alternative_identifiers	['MIR25', 'CG13-5135']
country	Spain
continent	Europe
region	Iberia
culture	Iberia_Chalcolithic
epoch	Copper Age
group	CAIB
comment	-
latitude	42.33000183105469
longitude	-3.5
sex	M
site	El Mirador Cave, Atapuerca, Burgos
site_detail	-
mt_hg	U3a1
ychr_hg	I2a1a1a
year_from	-3363
year_to	-1903
date_detail	3363-1903 BCE [other dates used in the Bayesian modeling analysis we used to obtain this range are (3950±30 BP, Beta-416457), 2857-2496 calBCE (4080±30 BP, Beta-416456), 2865-2575 calBCE (4110±30 BP, Beta-416458), 2900-2679 calBCE (4210±30 BP, Beta-416455), based on dates of other El Mirador samples)
bp	-
c14_lab_code	-
c14_sample_tag	-
c14_layer_tag	True
avg_coverage	234.0
sequence_source	bam
reference	Mathieson et al. 2015. Genome-wide patterns of selection in 230 ancient Eurasians. Nature, 528(7583), 499-503. (link)
data_link	https://www.ebi.ac.uk/ena/data/view/PRJEB11450
ychr_snps	['I:CTS674:6943522C->T', 'I:CTS1800:14073053G->A', 'I:CTS2536:14352669G->A', 'I:CTS4088:15389836T->C', 'I:CTS4209:15479899T->A', 'I:CTS5764:16471254A->G', 'I:CTS7831:17692855T->A', 'I:CTS8963:18582617C->T', 'I:CTS10941:22845794A->G', 'I:FGC2412:21689728A->G', 'I:FI2:8382265C->G', 'I:L503:21359407C->G', 'I:L578:8267857G->A', 'I:PF3627.2:6662712C->T', 'I:PF3640:7681156T->A', 'I:PF3641:7688470T->C', 'I:PF3661:8484606C->A', 'I:L772:15615533C->A', 'I:M1460:21862684A->C', 'I:PF3806:21525069G->A', 'I:PF3814:21839183A->G', 'I:PF3829:22458740A->G', 'I:PF3836:22525421T->G', 'I:Z16985:13804066G->C', 'I2a1:P37.2:14491684T->C', 'I:CTS7593:17548890G->A', 'I:L755:8465165C->T', 'I2a1a1a:L672:22228628T->A', 'I2a1a1:L158:23496560G->A']
mitopathos	-