identifier I1378
alternative_identifiers ['StPet2']
country Ukraine
continent Europe
region Pontic steppe
culture Ukraine_Neolithic
epoch Neolithic
group NEUk
comment son_of_I1732
latitude 48.29999923706055
longitude 35.13999938964844
sex M
site Vovnigi
site_detail -
mt_hg U4b
ychr_hg I2a2a1b1
year_from -4519
year_to -4343
date_detail 4519-4343 calBCE (5590±50 BP Poz-83446)
bp 5590±50
c14_lab_code Poz-83446
c14_sample_tag True
c14_layer_tag -
avg_coverage -
sequence_source bam
reference Jones et al. 2017. The Neolithic Transition in the Baltic Was Not Driven by Admixture with Early European Farmers. Current Biology, 27(4), 576-582. (link)
data_link https://www.ebi.ac.uk/ena/data/view/PRJEB18067
ychr_snps ['I:FGC2412:21689728A->G', 'I:L1197:14974451C->T', 'I:PF3661:8484606C->A', 'I:PF3794:21067903C->T', 'I:PF3800:21402723A->G', 'I2a2a1b1:L702:7629205C->T', 'I2a2a:P221:8353707C->A', 'I2a2a1b:CTS10057:19232160C->T']
mitopathos [{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '15693C', 'position': 15693, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CYB'], 'diseases': ['Possibly LVNC cardiomyopathy-associated']}, {'allele': '195C', 'position': 195, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['BD-associated / melanoma pts']}, {'allele': '499A', 'position': 499, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Endometriosis']}]