I1415

FASTA

Metadata

Reference

Data

identifier I1415
alternative_identifiers ['AG84/2', 'No. 7;No7']
country Jordan
continent Asia
region Near East
culture PPNB
epoch Neolithic
group PPNE
comment -
latitude 31.989999771118164
longitude 35.97999954223633
sex M
site 'Ain Ghazal
site_detail -
mt_hg T1a2
ychr_hg E1b1b1
year_from -8197
year_to -7653
date_detail 8197-7653 calBCE (8790±50 BP, Poz-81101, date suspect because C:N ratio of 4.15)
bp 8790±50
c14_lab_code Poz-81101,
c14_sample_tag True
c14_layer_tag -
avg_coverage 23.444746017456055
sequence_source bam
reference Lazaridis et al. 2016. Genomic insights into the origin of farming in the ancient Near East. Nature, 536(7617), 419-424. (link)
data_link https://www.ebi.ac.uk/ena/data/view/PRJEB14455
ychr_snps ['E1b1b1:CTS2216:14221285G->T', 'G2a2b2b1a:F2537:17595356T->C;G2a2b2b1a:F872:6932436G->C;G2a2b2b1a:F935:7227975T->C;G2a2b2b1a:PF3394:16390437G->A;G2a2b2b1a:PF3419:21445670A->G;G2a2b2b1:F1193:8429419C->T;G2a2b2b:CTS5434:16271769A->G;G2a2b2b:F1175:8399197G->A;G2a2b2b:F1429:8841269G->T;G2a2b2b:F1581:9646643G->C;G2a2b2b:F1760:14323704T->C;G2a2b2b:F2419:17192221G->A;G2a2b2b:F705:2659191T->C;G2a2b2b:PF3359:7877472G->A;G2a2b2b:PF3413:19399866T->C;G2a2b2b:PF3417:21113047T->C;G2a2b2b:PF3418:21332310G->A;G2a2b2:CTS9957:19170699C->T;G2a2b:F1733:14229971C->A;G2a2b:F2535:17589788C->T;G2a2b:F3139:21151007T->C;G2a2b:L32:14692227T->C;G2a2b:Z3260:13671506G->T;G2a:CTS11463:23122426G->A;G2a:CTS6753:17090976C->T;G2a:CTS9318:18819146T->A;G2a:F2301:16861108G->A;G2a:F2529:17571517A->G;G2a:F3088:20813445G->A;G2a:F4086:7727677C->T;G2a:L31:14028148C->A;G2a:M3397:21605685G->C;G2a:P15:23244026C->T;G2a:PF3141:23973594T->G;G2a:Z3240:10060449A->G;G2:CTS10089:19248446G->A;G2:CTS2406:14294068C->T;G2:CTS4264:15528792T->C;G2:CTS4413:15635425T->C;G2:CTS4703:15776024C->T;G2:CTS9885:19119067C->T;G2:F1189:8427005A->G;G2:F1239:8482393C->T;G2:F1294:8545324T->A;G2:F1393:8719593G->A;G2:F1647:9907842G->T;G2:F3198:21401188G->T;G2:F3220:21637589G->C;G2:F3226:21663882C->A;G2:F3344:22697266G->A;G2:F3536:23768744C->T;G2:M3465:7571775G->T;G2:M3579:21147058A->G;G2:P287:22072097G->T;G2:PF2909:13205148A->G;G2:PF3119:23739606G->T;G:CTS10026:19215139A->T;G:CTS1010:7143549C->T;G:CTS10706:22714204G->T;G:CTS10721:22729194C->T;G:CTS10723:22730922C->G;G:CTS11185:22997377C->G;G:CTS11228:23023554C->A;G:CTS11529:23151673T->C;G:CTS11907:23343857C->G;G:CTS12654:28658660G->T;G:CTS1283:7309873T->G;G:CTS13035:28783924C->A;G:CTS1612:13987230A->G;G:CTS175:2785630A->T;G:CTS2125:14190447A->Ghet;G:CTS2251:14235140C->T;G:CTS2271:14243137C->T;G:CTS2357:14273557C->T;G:CTS2517:14338503C->T;G:CTS34:2681740G->A;G:CTS373:6716150T->C;G:CTS4101:15397649A->G;G:CTS4238:15504804C->T;G:CTS4479:15667235G->A;G:CTS4523:15693336G->A;G:CTS4749:15797043A->G;G:CTS4761:15802681C->T;G:CTS4887:15888550C->T;G:CTS5317:16203361G->C;G:CTS5504:16325291T->C;G:CTS5640:16408569G->A;G:CTS5757:16469840A->G;G:CTS692:6955839A->Ghet;G:CTS6957:17210745C->T;G:CTS7092:17281783G->A;G:CTS7674:17610571G->A;G:CTS8023:17798903T->C;G:CTS827:7038432C->G;G:CTS9011:18615020A->T;G:CTS9710:19033112G->A;G:CTS9894:19124322A->T;G:CTS995:7132348G->C;G:F1383:8700380C->T;G:F1551:9448354A->G;G:L116:14989721C->G;G:L154:8614138T->G;G:L382:14469411C->A;G:L522:17533325A->C;G:M3248:7565637G->A;G:M3266:8422993T->A;G:M3450:6931141C->G;G:M3464:7537950C->T;G:M3468:7744050T->C;G:M3470:7830068T->C;G:M3473:7927218C->T;G:M3474:7930724C->A;G:M3477:8121059G->A;G:M3480:8327892T->A;G:M3481:8387539G->A;G:M3485:8563874C->T;G:M3486:8600158A->T;G:M3580:21162869C->G;G:M3582:21334507G->T;G:M3585:21412501G->A;G:M3595:21671839C->T;G:M3597:21865624G->A;G:M3599:21939157G->A;G:M3628:23793740C->A;G:P257:14432928G->A;G:PF2952:14577177G->A;G:PF3045:20823823C->T;G:PF3134:15275200C->G;G:S1435:13658486C->G;G:U23:14423856G->A']
mitopathos -