I1495

FASTA

Metadata

Reference

Data

identifier	I1495
alternative_identifiers	['HUNG347', 'NE7']
country	Hungary
continent	Europe
region	Pannonia
culture	Lengyel
epoch	Neolithic
group	LDN
comment	-
latitude	47.16999816894531
longitude	19.829999923706055
sex	M
site	Apc-Berekalya
site_detail	Site I
mt_hg	N1a1a1a
ychr_hg	I2a1
year_from	-4491
year_to	-4357
date_detail	4491-4357 calBCE (5598±32 BP, MAMS-14819)
bp	5598±32
c14_lab_code	MAMS-14819
c14_sample_tag	True
c14_layer_tag	-
avg_coverage	-
sequence_source	bam
reference	Gamba et al. 2014. Genome flux and stasis in a five millennium transect of European prehistory. Nature Communications, 5(1), ?. (link)
data_link	https://www.ncbi.nlm.nih.gov/sra?term=SRP039766
ychr_snps	['I:CTS1800:14073053G->A', 'I:CTS2193:14214481G->T', 'I:CTS2387:14286853T->C', 'I:CTS2514:14337364T->C', 'I:CTS4088:15389836T->C', 'I:CTS4209:15479899T->A', 'I:CTS5764:16471254A->G', 'I:CTS6265:16780748C->G', 'I:CTS6751:17090238C->G', 'I:CTS7469:17497181C->A', 'I:CTS7502:17511797A->G', 'I:CTS7831:17692855T->A', 'I:CTS8420:18018313C->A', 'I:CTS8963:18582617C->T', 'I:CTS10058:19233673A->G', 'I:CTS10941:22845794A->G', 'I:CTS11540:23156725C->T', 'I:FGC2412:21689728A->G', 'I:FGC2413:8262092C->T', 'I:FGC2415:13835003T->C', 'I:FI2:8382265C->G', 'I:L503:21359407C->G', 'I:L578:8267857G->A', 'I:L758:8536868C->G', 'I:L846:7856500C->T', 'I:L1197:14974451C->T', 'I:PF3627.2:6662712C->T', 'I:PF3640:7681156T->A', 'I:PF3641:7688470T->C', 'I:PF3660:8466652G->A', 'I:PF3661:8484606C->A', 'I:PF3665:8643763A->G', 'I:PF3794:21067903C->T', 'I:PF3796:21119888G->T', 'I:CTS6231:16751000C->T', 'I2:PF3664:8567995G->A', 'I:CTS5946:16567253A->G', 'I:CTS8876:18257568G->A', 'I:CTS9860:19104986G->A', 'I:CTS11979:23401471C->T', 'I:FGC2414:21155653C->T', 'I:FGC2416:7642823G->T', 'I:L772:15615533C->A', 'I:L847:23154034C->T', 'I:P212:3545070T->A', 'I:PF3814:21839183A->G', 'I:PF3815:21841289G->T', 'I:PF3817:21939618G->A', 'I:PF3829:22458740A->G', 'I:PF3836:22525421T->G', 'I:Z16985:13804066G->C', 'I:Z16987:22243817A->G', 'I2a1:P37.2:14491684T->C', 'I:CTS646:6926038T->A', 'I:CTS4848:15862842C->T', 'I:FI3:8485677C->A', 'I:PF3742:16354708G->A', 'I:CTS5650:16415916A->G', 'I:CTS8545:18078759T->A', 'I:L755:8465165C->T', 'I:CTS9618:18992894T->C']
mitopathos	-