| identifier |
I1738 |
| alternative_identifiers |
['StPet4', 'inv. 6204/4'] |
| country |
Ukraine |
| continent |
Europe |
| region |
Pontic steppe |
| culture |
Ukraine_Neolithic |
| epoch |
Neolithic |
| group |
NEUk |
| comment |
- |
| latitude |
48.29999923706055 |
| longitude |
35.13999938964844 |
| sex |
M |
| site |
Vovnigi |
| site_detail |
- |
| mt_hg |
U5a2 |
| ychr_hg |
I2a2a1b1b |
| year_from |
-5473 |
| year_to |
-5326 |
| date_detail |
5473-5326 calBCE (6420±40 BP, Poz-81153) |
| bp |
6420±40 |
| c14_lab_code |
Poz-81153 |
| c14_sample_tag |
True |
| c14_layer_tag |
- |
| avg_coverage |
- |
| sequence_source |
bam |
| reference |
Mathieson et al. 2018. The genomic history of southeastern Europe. Nature, 555(7695), 197-203.
(link)
|
| data_link |
https://www.ebi.ac.uk/ena/data/view/PRJEB22652
|
| ychr_snps |
['I:CTS674:6943522C->T', 'I:CTS1800:14073053G->A', 'I:CTS2514:14337364T->C', 'I:CTS4088:15389836T->C', 'I:CTS4209:15479899T->A', 'I:CTS6265:16780748C->G', 'I:CTS7469:17497181C->A', 'I:CTS7502:17511797A->G', 'I:CTS7831:17692855T->A', 'I:CTS8420:18018313C->A', 'I:CTS10058:19233673A->G', 'I:CTS10941:22845794A->G', 'I:FGC2413:8262092C->T', 'I:FGC2415:13835003T->C', 'I:FI2:8382265C->G', 'I:L503:21359407C->G', 'I:L578:8267857G->A', 'I:L758:8536868C->G', 'I:L846:7856500C->T', 'I:PF3640:7681156T->A', 'I:PF3641:7688470T->C', 'I:PF3660:8466652G->A', 'I:PF3665:8643763A->G', 'I:PF3794:21067903C->T', 'I:FI4:8873160G->T', 'I2:PF3664:8567995G->A', 'I:CTS88:2723755G->A', 'I:L41:19048602G->A', 'I:PF3836:22525421T->G', 'I:CTS7593:17548890G->A', 'I:FI3:8485677C->A', 'I:PF3742:16354708G->A', 'I:PF3837:22573702G->A', 'I2a2a1:CTS9183:18732197A->G', 'I2a2a1b1b:L699:2663920A->G', 'I2a2a1b1:L702:7629205C->T', 'I2a2a1b:CTS10100:19255890G->A', 'I2a2:L37:17516123T->C', 'I2a2:P218:17493630T->G', 'I2a2:L368:6931594C->Thet', 'I2a2a1b:CTS10057:19232160C->T', 'I:CTS5908:16548548G->A', 'I:FGC2412:21689728A->Ghet']
|
| mitopathos |
[{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '16192T', 'position': 16192, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-CR'], 'diseases': ['Melanoma patients']}, {'allele': '16270T', 'position': 16270, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-CR'], 'diseases': ['Melanoma patients']}]
|