I2017

FASTA

Metadata

Reference

Data

identifier I2017
alternative_identifiers ['M11-354', 'HAL18a']
country Germany
continent Europe
region central Europe
culture Linear Pottery
epoch Neolithic
group LBK
comment -
latitude 51.89583206176758
longitude 11.046667098999023
sex F
site Halberstadt-Sonntagsfeld
site_detail -
mt_hg K2a
ychr_hg -
year_from -5500
year_to -4850
date_detail 5500-4850 BCE
bp -
c14_lab_code -
c14_sample_tag -
c14_layer_tag -
avg_coverage -
sequence_source bam
reference Lipson et al. 2017. Parallel palaeogenomic transects reveal complex genetic history of early European farmers. Nature, 551(7680), 368-372. (link)
data_link https://www.ebi.ac.uk/ena/data/view/PRJEB22629
ychr_snps ['C1a2:V20:6845955G->A;C1a2:Y11342:7688365C->T;C1a2:Z28835:13200044G->T;C1:CTS6773:17100606C->T;C:CTS10720:22726491C->T;C:CTS11598:23185632A->G;C:CTS2955:14587658T->C;C:CTS6266:16780809G->A;C:CTS7301:17412198T->C;C:F1029:7629098T->C;C:F1804:14603298C->T;C:F2678:18030738C->T;C:F3043:19411754G->A;C:F3395:23031841G->A;C:F3703:16409159C->A;C:F847:6879365C->T;C:Y1767:21186558A->G;C:Z18049.2:21532389G->T;C:Z3958:7869808C->T;C:Z3974:8585701A->G;C:Z3986:9076205C->T;C:Z4099:22168468A->G;C:Z4139:23388830T->A']
mitopathos -