I2021
FASTA
Metadata
Reference
Data
| identifier | I2021 |
|---|---|
| alternative_identifiers | ['M11-S-350', 'HAL21a'] |
| country | Germany |
| continent | Europe |
| region | central Europe |
| culture | Linear Pottery |
| epoch | Neolithic |
| group | LBK |
| comment | - |
| latitude | 51.89583206176758 |
| longitude | 11.046667098999023 |
| sex | M |
| site | Halberstadt-Sonntagsfeld |
| site_detail | - |
| mt_hg | T2b |
| ychr_hg | G2a2a |
| year_from | -5500 |
| year_to | -4850 |
| date_detail | 5500-4850 BCE |
| bp | - |
| c14_lab_code | - |
| c14_sample_tag | - |
| c14_layer_tag | - |
| avg_coverage | - |
| sequence_source | bam |
| reference | Lipson et al. 2017. Parallel palaeogenomic transects reveal complex genetic history of early European farmers. Nature, 551(7680), 368-372. (link) |
| data_link | https://www.ebi.ac.uk/ena/data/view/PRJEB22629 |
| ychr_snps | ['G2a2a1a2a:PF3237:17017831G->A;G2a2a1a2a:PF3238:17256431G->A;G2a2a1a2:L91:21645555G->C;G2a2a1a2:PF3233:8895958T->C;G2a2a1:PF3155:14006343T->C;G2a2a1:PF3160:14926732C->T;G2a2a1:PF3170:18090604G->A;G2a2a1:S11769:8648696C->T;G2a2a:PF3149:7943188A->G;G2a2a:PF3159:14815695C->G;G2a2a:PF3175:18962113C->T;G2a2a:PF3181:21808944C->A;G2a2a:PF3185:22894488C->T;G2a2a:Z6178:7245721G->A;G2a:F1975:15588776A->C;G2a:F2274:16802506G->T;G2a:F2529:17571517A->G;G2a:L31:14028148C->A;G2a:P15:23244026C->T;G2a:PF3141:23973594T->G;G2:CTS11016:22899857A->G;G2:CTS1900:14116322T->A;G2:CTS4413:15635425T->C;G2:CTS6316:16817402C->T;G2:CTS7662:17597715C->T;G2:F1189:8427005A->G;G2:F1294:8545324T->A;G2:F1393:8719593G->A;G2:F1647:9907842G->T;G2:F3344:22697266G->A;G2:F3536:23768744C->T;G2:M3465:7571775G->T;G2:P287:22072097G->T;G2:PF3119:23739606G->T;G2:Y380:28799209T->Chet;G:CTS1010:7143549C->T;G:CTS11228:23023554C->A;G:CTS11294:23059496G->A;G:CTS11911:23346582A->C;G:CTS12654:28658660G->T;G:CTS1283:7309873T->G;G:CTS13035:28783924C->A;G:CTS1612:13987230A->G;G:CTS2120:14188094G->T;G:CTS2125:14190447A->G;G:CTS2136:14195292A->G;G:CTS2271:14243137C->T;G:CTS2357:14273557C->T;G:CTS4101:15397649A->G;G:CTS4238:15504804C->T;G:CTS4479:15667235G->A;G:CTS4523:15693336G->A;G:CTS4749:15797043A->G;G:CTS4761:15802681C->T;G:CTS5317:16203361G->C;G:CTS5504:16325291T->C;G:CTS5640:16408569G->A;G:CTS7674:17610571G->A;G:CTS8023:17798903T->C;G:CTS827:7038432C->G;G:CTS9894:19124322A->T;G:F1383:8700380C->T;G:L154:8614138T->G;G:L402:15204708T->G;G:L522:17533325A->C;G:L770:2863466A->T;G:M201:15027529G->T;G:M3258:7992031T->C;G:M3266:8422993T->A;G:M3450:6931141C->G;G:M3466:7614386G->A;G:M3468:7744050T->C;G:M3471:7840218C->A;G:M3472:7899682T->C;G:M3474:7930724C->A;G:M3479:8231862G->C;G:M3480:8327892T->A;G:M3482:8454233G->A;G:M3485:8563874C->T;G:M3580:21162869C->G;G:M3595:21671839C->T;G:M3599:21939157G->A;G:M3628:23793740C->A;G:PF2918:13679469G->A;G:PF3134:15275200C->G;G:S1435:13658486C->G;G:S8863:4179056G->A;G:U21:15204710A->C;G:Z3262:13676268G->A;G:Z6325:13806058C->T'] |
| mitopathos | - |