I2037

FASTA

Metadata

Reference

Data

identifier I2037
alternative_identifiers ['HAL39b']
country Germany
continent Europe
region central Europe
culture Linear Pottery
epoch Neolithic
group LBK
comment -
latitude 51.89583206176758
longitude 11.046667098999023
sex M
site Halberstadt-Sonntagsfeld
site_detail -
mt_hg H1e
ychr_hg G2a2a
year_from -5210
year_to -5002
date_detail 5210-5002 calBCE (6144±32 BP, KIA-40343)
bp 6144±32
c14_lab_code KIA-40343
c14_sample_tag True
c14_layer_tag -
avg_coverage -
sequence_source bam
reference Lipson et al. 2017. Parallel palaeogenomic transects reveal complex genetic history of early European farmers. Nature, 551(7680), 368-372. (link)
data_link https://www.ebi.ac.uk/ena/data/view/PRJEB22629
ychr_snps -
mitopathos [{'allele': '3010A', 'position': 3010, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-RNR2'], 'diseases': ['Cyclic Vomiting Syndrome with Migraine / high altitude disease risk factor']}, {'allele': '5460A', 'position': 5460, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-ND2'], 'diseases': ['AD / PD / LHON']}]