identifier |
I2163 |
alternative_identifiers |
['Merich2', 'Burial Mound N1', 'individual N5'] |
country |
Bulgaria |
continent |
Europe |
region |
Balkans |
culture |
Bulgaria_MLBA |
epoch |
Bronze Age |
group |
BABA |
comment |
- |
latitude |
42.130001068115234 |
longitude |
25.489999771118164 |
sex |
M |
site |
Merichleri, Kairyaka necropolis |
site_detail |
Season '12, burial mound N 1 |
mt_hg |
U5a2 |
ychr_hg |
R1a1a1b2 |
year_from |
-1750 |
year_to |
-1625 |
date_detail |
1750-1625 calBCE (3400±30 BP, Beta-432796) |
bp |
3400±30 |
c14_lab_code |
Beta-432796 |
c14_sample_tag |
True |
c14_layer_tag |
- |
avg_coverage |
- |
sequence_source |
bam |
reference |
Mathieson et al. 2018. The genomic history of southeastern Europe. Nature, 555(7695), 197-203.
(link)
|
data_link |
https://www.ebi.ac.uk/ena/data/view/PRJEB22652
|
ychr_snps |
['R1a1a1:Page7:14498990C->T', 'R1a1a:L168:16202177A->G', 'R:CTS3622:15078469C->G', 'R:F459:18017528G->T', 'R:L1347:22818334C->T', 'R1:CTS2565:14366723C->T', 'R1:CTS5611:16394489T->G', 'R1:L875:16742224A->G', 'R1:P286:17716251C->T', 'R:CTS8311:17930099C->A', 'R:F82:7548900G->A', 'R:M651:9889199G->A', 'R:P280:21843090C->G', 'R1a1a:M515:14054623T->A', 'R1a:L62:17891241A->G', 'R1a:L63:18162834T->C', 'R1a:L145:14138745C->A', 'R1:CTS997:7132713G->A', 'R1:P231:9989615A->G', 'R1:P236:17782178C->G', 'R1:P238:7771131G->A', 'R1:P294:7570822G->C', 'R:CTS5815:16491135C->T', 'R:CTS7876:17722802G->A', 'R:CTS7880:17723850C->T', 'R:F63:7177189G->A', 'R:F295:15594523A->G', 'R:F652:23631629C->A', 'R:FGC1168:15667208G->C', 'R:L1225:22733758C->G', 'R:M734:18066156C->T', 'R:M799:23134896C->T', 'R:P227:21409706G->C', 'R:CTS2913:14561760A->G', 'R:F765:24360964G->A', 'R1:CTS3123:14674176A->C', 'R1:P225:15590342G->T', 'R:F154:8558505T->C', 'R:CTS9005:18611644A->T', 'R1a1a1b:S224:8245045C->T', 'R1a1a1b:S441:7683058G->A', 'R1a1a1b2:F992:7552356G->A']
|
mitopathos |
[{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '16093C', 'position': 16093, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Cyclic Vomiting Syndrome']}, {'allele': '16192T', 'position': 16192, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-CR'], 'diseases': ['Melanoma patients']}, {'allele': '16270T', 'position': 16270, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-CR'], 'diseases': ['Melanoma patients']}, {'allele': '7444A', 'position': 7444, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CO1'], 'diseases': ['LHON / SNHL / DEAF']}]
|