| identifier |
I2176 |
| alternative_identifiers |
['12'] |
| country |
Bulgaria |
| continent |
Europe |
| region |
Balkans |
| culture |
Bulgaria_EBA |
| epoch |
Bronze Age |
| group |
BABA |
| comment |
- |
| latitude |
43.060001373291016 |
| longitude |
26.979999542236328 |
| sex |
M |
| site |
Smyadovo |
| site_detail |
- |
| mt_hg |
U1a1 |
| ychr_hg |
I2a2a1b |
| year_from |
-3338 |
| year_to |
-3025 |
| date_detail |
3338-3025 calBCE (4470±30 BP, Ly-5516) |
| bp |
4470±30 |
| c14_lab_code |
Ly-5516 |
| c14_sample_tag |
True |
| c14_layer_tag |
- |
| avg_coverage |
- |
| sequence_source |
bam |
| reference |
Mathieson et al. 2018. The genomic history of southeastern Europe. Nature, 555(7695), 197-203.
(link)
|
| data_link |
https://www.ebi.ac.uk/ena/data/view/PRJEB22652
|
| ychr_snps |
['I:CTS1800:14073053G->A', 'I:CTS2387:14286853T->C', 'I:CTS2514:14337364T->C', 'I:CTS4209:15479899T->A', 'I:CTS6265:16780748C->G', 'I:CTS7502:17511797A->G', 'I:CTS7831:17692855T->A', 'I:CTS8420:18018313C->A', 'I:CTS8963:18582617C->T', 'I:CTS10058:19233673A->G', 'I:FGC2412:21689728A->G', 'I:FGC2413:8262092C->T', 'I:FI2:8382265C->G', 'I:L578:8267857G->A', 'I:L758:8536868C->G', 'I:PF3641:7688470T->C', 'I:CTS5946:16567253A->G', 'I:CTS11441:23113271C->G', 'I:L41:19048602G->A', 'I2:L68:18700150C->T', 'I:CTS646:6926038T->A', 'I:PF3837:22573702G->A', 'I2a2a:L34:7716262A->C', 'I:CTS9269:18789763C->T', 'I2a2:L368:6931594C->T', 'I2a2a:P223:16699334C->G', 'I2a2a1b:CTS10100:19255890G->A', 'I2a2:L37:17516123T->C']
|
| mitopathos |
[{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}]
|