I2452

FASTA

Metadata

Reference

Data

identifier I2452
alternative_identifiers ['BEDFM2009.12', 'feature F.66 skeleton 186']
country Great Britain
continent Europe
region British Isles
culture Bell Beaker
epoch Bronze Age
group BBC
comment -
latitude 52.150001525878906
longitude -0.3799999952316284
sex M
site Dairy Farm, Willington, England
site_detail -
mt_hg H1e1a
ychr_hg R1b1a1a2a1a2c1
year_from -2276
year_to -1980
date_detail 2276-1980 calBCE [2276-2029 calBCE (3735±35 BP, Poz-83405), 2198-1980 calBCE (3700±30 BP, Beta-444979)]
bp 3735±35
c14_lab_code Poz-83405
c14_sample_tag True
c14_layer_tag -
avg_coverage 890.1439819335938
sequence_source bam
reference Olalde et al. 2018. The Beaker phenomenon and the genomic transformation of northwest Europe. Nature, 555(7695), 190-196. (link)
data_link http://www.ebi.ac.uk/ena/data/view/PRJEB23635
ychr_snps -
mitopathos [{'allele': '3010A', 'position': 3010, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-RNR2'], 'diseases': ['Cyclic Vomiting Syndrome with Migraine / high altitude disease risk factor']}, {'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '5460A', 'position': 5460, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-ND2'], 'diseases': ['AD / PD / LHON']}]