I2565
FASTA
Metadata
Reference
Data
| identifier | I2565 |
|---|---|
| alternative_identifiers | ['1238 (Companion)'] |
| country | Great Britain |
| continent | Europe |
| region | British Isles |
| culture | Bell Beaker |
| epoch | Bronze Age |
| group | BBC |
| comment | - |
| latitude | 51.15999984741211 |
| longitude | -1.7699999809265137 |
| sex | M |
| site | Amesbury Down, Wiltshire, England |
| site_detail | - |
| mt_hg | W1+119 |
| ychr_hg | R1b1a1a2a1a2c |
| year_from | -2457 |
| year_to | -2147 |
| date_detail | 2457-2147 calBCE (3829±38 BP, OxA-13562) |
| bp | 3829±38 |
| c14_lab_code | OxA-13562 |
| c14_sample_tag | True |
| c14_layer_tag | - |
| avg_coverage | 44.649600982666016 |
| sequence_source | bam |
| reference | Olalde et al. 2018. The Beaker phenomenon and the genomic transformation of northwest Europe. Nature, 555(7695), 190-196. (link) |
| data_link | http://www.ebi.ac.uk/ena/data/view/PRJEB23635 |
| ychr_snps | - |
| mitopathos | [{'allele': '12705T', 'position': 12705, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CO1'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '5460A', 'position': 5460, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-ND2'], 'diseases': ['AD / PD / LHON']}] |