I2567

FASTA

Metadata

Reference

Data

identifier	I2567
alternative_identifiers	['GENSCOT14', 'Burial 5', 'Cist 1']
country	Great Britain
continent	Europe
region	British Isles
culture	Scotland_CA_EBA
epoch	Bronze Age
group	BABI
comment	-
latitude	55.970001220703125
longitude	-2.444000005722046
sex	M
site	Dryburn Bridge, East Lothian, Scotland
site_detail	-
mt_hg	U4a1a
ychr_hg	R1b1a1a2a1a2
year_from	-2275
year_to	-1884
date_detail	2275-1884 calBCE [2130-1883 calBCE (3615±40 BP, SUERC-4072), 2274-2023 calBCE (3725±35 BP, SUERC-4083)]
bp	3615±40
c14_lab_code	SUERC-4072
c14_sample_tag	True
c14_layer_tag	-
avg_coverage	372.8900146484375
sequence_source	bam
reference	Olalde et al. 2018. The Beaker phenomenon and the genomic transformation of northwest Europe. Nature, 555(7695), 190-196. (link)
data_link	http://www.ebi.ac.uk/ena/data/view/PRJEB23635
ychr_snps	-
mitopathos	[{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '15693C', 'position': 15693, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CYB'], 'diseases': ['Possibly LVNC cardiomyopathy-associated']}, {'allele': '195C', 'position': 195, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['BD-associated / melanoma pts']}, {'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '499A', 'position': 499, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Endometriosis']}, {'allele': '961C', 'position': 961, 'status': 'Unclear', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-RNR1'], 'diseases': ['DEAF / possibly LVNC-associated']}]