I2610

FASTA

Metadata

Reference

Data

identifier I2610
alternative_identifiers ['MOA 1973.4H Box 167D']
country Great Britain
continent Europe
region British Isles
culture England_CA_EBA
epoch Bronze Age
group BABI
comment -
latitude 54.970001220703125
longitude -1.7300000190734863
sex F
site Summerhill, Blaydon, Tyne and Wear, England
site_detail -
mt_hg U2e1b
ychr_hg -
year_from -1935
year_to -1745
date_detail 1935-1745 calBCE (3515±35 BP, Poz-83498)
bp 3515±35
c14_lab_code Poz-83498
c14_sample_tag True
c14_layer_tag -
avg_coverage 11.366499900817871
sequence_source bam
reference Olalde et al. 2018. The Beaker phenomenon and the genomic transformation of northwest Europe. Nature, 555(7695), 190-196. (link)
data_link http://www.ebi.ac.uk/ena/data/view/PRJEB23635
ychr_snps -
mitopathos [{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '988A', 'position': 988, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-RNR1'], 'diseases': ['Possible DEAF risk factor']}]