I2656

FASTA

Metadata

Reference

Data

identifier I2656
alternative_identifiers ['GENSCOT25', 'I2656_d']
country Great Britain
continent Europe
region British Isles
culture Scotland_LBA
epoch Bronze Age
group BABI
comment -
latitude 55.970001220703125
longitude -2.8959999084472656
sex M
site Longniddry, Grainfoot, East Lothian, Scotland
site_detail -
mt_hg H2a2a2
ychr_hg R
year_from -1278
year_to -979
date_detail 1278-979 calBCE (2930±50 BP, GU-2762)
bp 2930±50
c14_lab_code GU-2762
c14_sample_tag True
c14_layer_tag -
avg_coverage 115.7229995727539
sequence_source bam
reference Olalde et al. 2018. The Beaker phenomenon and the genomic transformation of northwest Europe. Nature, 555(7695), 190-196. (link)
data_link http://www.ebi.ac.uk/ena/data/view/PRJEB23635
ychr_snps -
mitopathos [{'allele': '16129A', 'position': 16129, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Cyclic Vomiting Syndrome with Migraine']}, {'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}]