I2657

identifier	I2657
alternative_identifiers	['GENSCOT26']
country	Great Britain
continent	Europe
region	British Isles
culture	Scotland_N
epoch	Neolithic
group	NEBI
comment	-
latitude	56.41999816894531
longitude	-5.4720001220703125
sex	M
site	Macarthur Cave, Oban, Argyll and Bute, Scotland
site_detail	-
mt_hg	W1+119
ychr_hg	I2a2a
year_from	-3951
year_to	-3780
date_detail	3951-3780 calBCE (5052±30 BP, SUERC-68701)
bp	5052±30
c14_lab_code	SUERC-68701
c14_sample_tag	True
c14_layer_tag	-
avg_coverage	110.18299865722656
sequence_source	bam
reference	Olalde et al. 2018. The Beaker phenomenon and the genomic transformation of northwest Europe. Nature, 555(7695), 190-196. (link)
data_link	http://www.ebi.ac.uk/ena/data/view/PRJEB23635
ychr_snps	-
mitopathos	[{'allele': '12705T', 'position': 12705, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CO1'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '195C', 'position': 195, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['BD-associated / melanoma pts']}, {'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '5460A', 'position': 5460, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-ND2'], 'diseases': ['AD / PD / LHON']}]